Directory of computer-aided Drug Design tools

Updated on 9/1/2017. Currently 825 links.
This Tag Cloud representation was created based on the 1257699 links that have been followed since 08 Sep 2010

depict   VolSurf   SuperTarget Database   CACTVS   ESyPred3D   NRLiSt   MOLARIS-XG   Indigo-cano   Binding MOAD (Mother Of All Database)   PPS   RA   Zodiac   FunFOLDQA   MOE   Jmol   Mobile Molecular DataSheet   Free ADME Tools   Blind Docking Server   SWISS-MODEL Repository   DockingServer   Knodle   ProPairs   ICM-PocketFinder   Autodock Vina plugin for PyMOL   BlueDesc   GFscore   cQSAR   MolSign   DITOP   CABS   LCT   PoseView   ASEDock   NOC     JChem for Excel   KIN   CPHmodels   Phase   Desmond   DUD   Molconn-Z   BindingDB   PEPstr   CCDC/Astex Validation set   SiteHound   MetaDrug   Tinker   ADME-Tox   Visual Molecular Dynamics (VMD)   GFscore   GASP   Dehydron   VLife Engine   MOE   CAESA   Open Drug Discovery Toolkit   ACD/ChemSketch   BAPPL complexes set   FINDSITE-LHM   e-LEA3D   Zinc Database   I-TASSER   CREDO   ADMEAP   WOMBAT-PK   Fleksy   MED-SuMo   Biogenerator   SimDOCK   MED-Ligand   Hyde   SwissParam   META   Autogrow   iProtein   TTD   DataWarrior   RDKit   LEADS-PEP   CMol   BARISTA   R.E.D. Server   I-TASSER   MSPocket   Ligand Protein DataBase (LPDB)   Open3DQSAR   DEPTH   GALAHAD   VFFDT   Computer-Aided Drug-Design Platform using PyMOL   Active Site Prediction   E-Dragon   ISIS/Draw   SuperDrug Database   H++   REACTOR   smi23d   NNScore   iPharosDreams   SMARTCyp Web Service   SwissSimilarity   Tripos Mol2   GPCRautomodel   ScaffoldTreeGenerator   SimCYP for iPhone.   VLifeDock   OLN JSDraw   CABRAKAN   ChemJuice Grande   Leadscope Toxicity Database   RACHEL   QSARPro   CombiGlide   Geno3D   KEGG DRUG   MetaDock   Bluto   Feature Trees   Ball&Stick   DS Visualizer   DNA Drug complex dataset   Chemicalize   LigASite   eHITS_Score   ChemT   ProBis   MedChem Studio   OCHEM   CoLibri   ChemMapper   CHARMM   Jamberoo   HURAKAN   GANDI   DUD.E   SVILP_ligand   RasMol   Pdbfil   PharmDock   GIF/PNG-Creator   PoseView   Bodil   Corina   WWMM Web Services   Indigo   LigQ   Target Hunter of Small Molecule   GPCRautomodel   CheS-Mapper   Autodock Vina   Strip-it   CoLibri   VOIDOO   DockVision   Rosetta Ligand   isoCYP   e-LEA3D   MOE   SuperHapten   Corina online demo   SIDER   PhAST   Score   Chembench   ACD/Tox Suite   BSR   LIGSITEcsc web server   INDDEx   DrugBank   Indigo-depict   PSiFR   Molegro Data Modeller   Vconf   COSMOS   HMDB   SMARTSeditor   SimCYP   hint!   Protein DataBank (PDB)   Pred-hERG   MATCH   Avogadro   e-LEA3D   Docking At UTMB   PreADMET   Chem4D   FLAP   VinaMPI   CABS-flex   LigandFit   PrimaDORAC   PPB   VADAR   Ligand Expo   ZincPharmer   pymacs   Smiles2Monomers   Imago OCR Visual Tool   LigPrep   ProModel   Indigo-deco   Ligplot+   JME Molecular Editor   CNS (Crystallography & NMR System)   NNScore   Vcharge   SketchEl   PASS   aMD   Computer-Aided Drug-Design Platform using PyMOL   3D-Jigsaw   ToxPredict   KBDOCK   PreDDICTA   PRO_LIGAND   ChemMobi   MORE   PASS   Hammerhead   Aggregator Advisor   MOLFEAT   Chemsol   BKchem   LeadGrow   CueMol   MolAxis   PDBinder   SCIGRESS   PDB_Hydro   DockoMatic   PaDEL-Descriptor   iScreen   EPOSBP   STITCH   Surflex-Sim   chunk-TASSER   DTome   OCHEM Database   COSMOS Viewer   JOElib   t3db   metaPocket   ACToR   Blaster   StructureMate   Corina   VAMMPIRE   Molprime+   Mcule database   Spectrophores   GHECOM   Cavitator   DSXONLINE   MedChem Studio   CDK Descriptor Calculator GUI   UM-BBD Pathway Prediction System   PyRosetta   COSMOS   AMMP VE   ChemBank   ModEval   iview   FragmentStore   smi23D web service   pep:MMs:MIMIC   FINDSITE-LHM   COMPACT   GLL   SeeSAR   MOLE db   Bioclipse   DLD   VEGA WE   Amber   Robetta   LigMerge   Codessa   eFindSite   TASSER-Lite   Glide Fragment Library   Virtual LogP   ChemDraw   Computer-Aided Drug-Design Platform using PyMOL   SiMMap   MUV   SAR Carcinogenicity Database   MetaTox   Atom 3D   Approved Drugs   PASSonline   SuperCyp   GMA (Graph based Molecular Alignment)   SCRWL   Chirys Draw   Biskit   MEXAlert   YASARA Dynamics   BDT   MolPad   Discovery Studio TOPKAT Software   MolEdit   Blaster   MetaPrint2D-React.   PEP-FOLD   CHARMM-GUI   LISE   ModLoop   Frog2   DS Visualizer   MPACK   Superimposé   FINDSITECOMB   ADME DB   Molinspiration WebME Molecule Editor   PK-Sim   Property calculator   DAIM-SEED-FFLD   Chemsol web service   Leadscope   Itzamna   MOLA   ParaDockS   sc-PDB   Jmol Molecular Visualization   CLICK   PDBSITE   XDrawChem   iKinase Universal   Metabolizer Preview   DecoyFinder   iMolecular Draw   MultiBind   RaptorX   FoldX   SPORES   Zinc15 Database   LIGSITEcsc   Nucleos   Align-it   HHpred   ChemCom   Chemkit   MCSS   Chemozart   BOMB   DoGSiteScorer   PyRX   SitesBase   MetaSite   ChemDB/Datasets   ACD/DMSO Solubility   Allegrow   PDBSiteScan   LigandScout   SimiCon   AutoT&T2   ADAPT   ConCavity   ModWeb   StarDrop   TopoTools   Autodock Vina plugin for PyMOL   MMsINC   Pardock   Virtual library Repository   IBIS   Datasets from the Milano Chemometrics and QSAR Research Group   ACD/PhysChem Suite   pKalc   HyperChem   Binding Database   ChemDiff   HYBRID   McQSAR   ProCESS   Elemental   1-Click Docking   PocketPicker   CAVER   iAPBS   1-Click Scaffold Hop   Imago Console Application   CONCERTS   FINDSITE   ParamChem   fragmentizer   CAVER   SwissADME   SiteEngine   SMART   SwissSideChain   SAR Genetox Database   Molekel   APBS   Balloon   OPENMD   BAPPL server   VDS   FAME2   MCASE   GLASS   Smi2Depict   Molcode Toolbox   SwissBioisostere   SwissDock   MarvinSketch   IntFOLD   AutoclickChem   HOMODELLER   ToxiPred   MMTSB   KIZIN   LAMMPS   IC50-to-Ki converter   PocketAnnotate   PLANTS   ChemSAR   SAR Table   POLYVIEW-MM   EADock   PROPKA   RaptorX web server   ACPC   Marvin molecule editor and viewer   FlexX, Flex-Ensemble (FlexE)   ADMET Modeler   NDKmol   GLIDA   SLITHER   AutoclickChem   BALL   Ligand Expo   Adun molecular simulation   TIP database   Epik   Molinfo   OncoLogic   SMARTSviewer   DockoMatic   SuperLigands   BALLView   TexMol   TOXNET   FITTED   ArbAlign   ModPipe   FRED   VCharge   ModBase   ALOGPS   LUDI   Protein Ligand Database (PLD)   PharmMapper   PocketQuery   SEA   FALC-Loop   3D Molecule View   jsMolEditor   FunFOLD   SMPDB   ReCore   SCUBIDOO   OSRA web service   ePMV   Atomdroid   TouchMol Deskop Application   Daylight SMILES   Qmol   SMARTS format   GEMDOCK   ParaDockS   FLOG   VAMMPIRE-LORD   Chemtool   AmberTools   Metrabase   EUDOC   ACEMD (Accelerating bio-molecular simulations)   CHARMMing.org   MemBuilder   GPCR-Bench   Molinspiration bioactivity score   PLATINUM   SiteHound-web   PACT-F   VirtualToxLab   OSRA   DCE ChemPad   LeView   Chem3D for iPad   Mol2Mol   Pymol   Glide Ligand Decoys Set   ChemSpotlight   XScore-LogP   ADAM   Hologram QSAR (HQSAR)   MetaPrint2D   GastroPlus   Catalyst   SPRESImobile   fpocket web server   CASTp   ACD/Structure Design Suite   Structural Database (CSD)   Chil2 Viewer   Flux   Fconv   PepSite 2   OpenMolGRID   BetaDock   iSpartan   EMIL   ADMEWORKS Predictor   FlipDock   IK   The ADME database   UCSF-FDA Transportal   idock   CueMol for iOS   KeyRecep   3DLigandSite   SuperLooper   PHYSPROP   CHARMm   CODESSA Pro   ORAC   Cloe Predict   CLiBE   Pred-Skin   POVME   ChemWriter   Meteor   rDock   CONFLEX   PDBbind   PubChem Mobile   Toxicity checker   MetabolExpert   MolScore-Drugs   CDK (Chemistry Development Kit)   Natural product likeness calculator   JKluster   SuperToxic   SeRAPhiC   PyMOL on the iPad.   BAPPL-Z server   BREED   FlexPepDock   QSAR with CoMFA   Open3DALIGN   e-Drug3D   PockDrug   PREPARE   iDrug   IsoMIF   Modeller   Discovery Studio ADMET Software   istar   HMMSTR/Rosetta   wwLig-CSRre   LigBase   ChemDoodle   SELECT   OpenAstexViewer   Phosfinder   Siena   OpenSMILES   PLiP   CATS   Kuntz Protein Test Set   Force Field Explorer   iMolview   Pocketome   eDesign   Chirys Sketch   HomDock   SWISS-MODEL   FINDSITE   PUMA   SIDER   iBabel   iScreen   MEGA   HSITE   Ki Database   YASARA View   ShaEP   MedChem Designer   Chemspider   admetSAR   Cn3D   YASARA Structure   eDesign   HazardExpert Pro   iHyperChem   Tuplets   ChemIDPlus   Molegro Virtual Docker   New Human GPCR modeling and virtual screening database   Computer-Aided Drug-Design Platform using PyMOL   FlexAID   ProSide   DASPfind   CoG   OSIRIS Property Explorer   Glide   QuteMol   ADMEWORKS ModelBuilder   pymacs   Friend   fPOP   POSIT   GOLD   SURFNET   PatchDock   PDB Hydrogen Addition   eFindSite   Imago   admetSAR   Accelrys Draw   MedChem Studio   DrugLogit   Crystal Studio   OSIRIS Property Explorer   iPred   PrologP/PrologD   KeyRecep   DNP   PubChem   QikProp   Ketcher   SuperPred   RasTop   PocketDepth   DART   cQSAR   ChemDoodle Mobile   clogP   Almond   JChem for Excel   ilib diverse   IMPACT-F   iHyperChem Free Version   TouchMol for Office   ProBuilder   3-D QSAR   IXCHEL   Bingo   BioAdviser   pkCSM   Surflex-Dock   Molecules   ChemProt   SCIGRESS   LOMETS   DG-AMMOS   BSP-SLIM   GalaxyDock   Pose & Rank   SiteComp   kinDOCK   SHAFTS   MolEngine   TarFisDock   Epik   Molegro Virtual Docker   ChemDB/ChemicalSearch   PharmaGist   GriDock   fpocket   OpenBabel   Lead Finder   MOE   AnchorQuery   UCSF Chimera   Protein Preparation Wizard   MEDock   PASS   ChemSpider Mobile   RCSB PDB.   NAMD   Partial Least Squares Regression (PLSR)   MolSketch   MayaChemTools   SPRESIweb   DG-AMMOS   Combinatorial library design   PDB2PQR Server   PDB View 3D   QUARK   DDDPlus   POSIT   HitPick   hint!   PROMISCUOUS   Ascalaph   AURAmol   Indigo-depict   PocketAnnotate database   PDBs   ICM   ToxCreate   MOE   LOMETS   wwwPDBinder   InChI   Screen Suite   Chrawler   PMP   PocketPicker web server   GLmol   3D Molecules Edit&Drill   VEGA ZZ   GlamDock   ChEBI   OMEGA   ChemDoodle   KnowItAll - ADME | Tox Edition   Chemical Identifier Resolver   LiSiCA   POCASA   Protinfo ABCM   Build model   REDUCE   ACD/ADME Suite   GROMACS   LEGEND   smirep   Coot   Scaffold Hunter   iGEMDOCK   Screen2   E-novo   LCT   Pattern Count Screen   CDocker   Topomer CoMFA   ChIP   idTarget   SwissTargetPrediction   Pharmer   ISE-Dock   sc-PDB-Frag   SDF format   LigPrep   ADMET Predictor   DOCK   MODEL - Molecular Descriptor Lab   PropKa   ChemDiff   Spartan   Legio   E-Babel   PROtein SURFace ExploreR   DrugMint   TouchMol Web   MOIL   pDynamo   AquaSol   PharmMapper   Prime   DOVIS   istar   GHECOM web server   LISE   ICM-Browser   MetaTASSER   CrystalDock   PharmBench   phyre   Abalone   CASETOX   ProBiS-CHARMMing   Shape-it   eMolecules   SiteMap   MolScore-Antivirals   CHAAC   CoCoCo   Swiss-PDB Viewer / DeepView   Comparative Toxicogenomics Database (CTD)   SPiDER   SiteEngine   Key3D   BINANA   LigBuilder   PerlMol   HaptenDB   X-score   VSDMIP   PDSP   3DLigandSite   CSNAP   NRDBSM   LipidBuilder   GDD   pro-sp3-TASSER   ElectroShape Polypharmacology server   KOWWIN - EPI Suite   WinDock   LPCCSU   Indigo   MolScore-Antibiotics   PharmaGist   DEPTH   WOMBAT   ZINClick   KKB   PDB format   PSILO   MedChem Studio   MATCH server   PyRosetta   SMARTCyp   PLT   Pattern Match Counter   Fuzzee   Filter-it   Dundee PRODRG2 Server   Glide Fragment Library   The ADME databases   PatchSearch   iMolecular Builder   Molecule Viewer 3D   MacroModel   ClogP/CMR   SplitPocket   ProteinPrepare   ChemDraw for iPad   OpenStructure   BioDrugScreen   Cloe Knowledge   SuMo   XScore-LogP   MetaPred   VLifeBase   MS-Dock   FAF-Drugs2   Aggregator Advisor   MolProbity   TorsionAnalyzer   MOE   GeneSilico Metaserver   The SDF Toolkit in Perl 5   LoFT   BUILDER   ChEMBL   PreADME   Superpose   SCORPIO   JChemPaint   MovieMaker   Derek Nexus   Autodock   AffinDB   IXTAB   OLN Chem4SharePoint   ChemDiff   Lazar   MOE   PDBe motifs and Sites   ChemJuice   ADRIANA.Code   STITCH   TCM   HADDOCK   Online SMILES Translator and Structure File Generator   Pcetk